genewise output
Score 161.46 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000652_2.0   22 LGAVGAAIAGLILANTDFLLTKSAPATVDYLANADLKTIDG         
                     L AV   +A LI + TD+  TK A A ++ L N +LK  +G         
                     LKAVSLFVAELISSITDWFQTKPAWANLEVLENTELKPTEG         
OMLM01011960.1:49778 caggactgggcaataagttcaacgtgacggcgaagcacagg         
                     tactgtttcattgctcagtacaccgcatattaacataccag         
                     ggagcgttagcccccacgcgcgaagccaagggcaaggctat         


SPP00000652_2.0   63                           ERSLKAKALWEKSGAVIMAVRRP 
                                                   KAK LWEK+GAVIM VRRP 
                               D:V[gtc]        YEKQKAKTLWEKTGAVIMVVRRP 
OMLM01011960.1:49901 GGTGAGTC  Intron 1   TAGTCtgacagaactgaagggaaggccc 
                      <1-----[49902:50084]-1>  aaaaacactgaacgctttttggc 
                                               tgaggcgtaggatatgcgttggt 


SPP00000652_2.0   87 GXFLCRE                       EASELSSLKPQLDELGVPL 
                     GX+LCRE                       EA+ELSSLK QL EL VPL 
                     GXLLCRE                       EAAELSSLKSQLQELEVPL 
OMLM01011960.1:50156 gtcttagGTATGAA  Intron 2   CAGggggcttcatcccgcggcc 
                     ggttgga<0-----[50177:50276]-0>accatcctacataatatct 
                     aaagcag                       gttggctggcgggatactc 


SPP00000652_2.0  113 YAVVKENVGTEIQDFRPHFAGEIFLDEK                      
                     +AVVKEN+G E+  F+ +F+G++++D+K                      
                     FAVVKENLGNELNCFKKYFSGKVYVDQK                      
OMLM01011960.1:50334 tgggagacgagcattaatttgagtggcaGTCTGCT  Intron 3     
                     tcttaaatgaatagtaaatcgatataaa<0-----[50418:50534]  
                     ctggaactctggcccggcctggttgcgg                      


SPP00000652_2.0  141    QAFYGPQQRKMGGLGFIRLGVWQNFVRAWRAGYQGNMNGEGFILGG 
                        + FYGPQ R M    F+R+GVW N+ RA R G++GN+ GEGFILGG 
                        RNFYGPQTRWMFLSMFLRIGVWMNIWRAHRKGFRGNLRGEGFILGG 
OMLM01011960.1:50532 TAGaattgccactatctatccaggtaaatagcaagtagacagggtacgg 
                     -0>gatagcacggtttctttgtgtgtatggcagagtggatggagtttgg 
                        atccctaagggtccgtatttgggtcggccggccgacaataatcata 


SPP00000652_2.0  187 VFVMGSGGQ                       GVLLEHREKEFGDKVSL 
                     VFV+G G Q                       GVLLEHREKEFG+K +L 
                     VFVIGPGDQ                       GVLLEHREKEFGNKANL 
OMLM01011960.1:50673 gtgagcggcGTGGGCT  Intron 4   TAGggtcgccgagtgaagat 
                     ttttgcgaa<0-----[50700:50777]-0>gtttaagaaatgaacat 
                     ctctgattg                       ttgggcagggtgtagtg 


SPP00000652_2.0  213 ESVLEAAKKV                                        
                      +VL+ A+K+                                        
                     LAVLKTARKM                                        
OMLM01011960.1:50829 tggcaagcaa                                        
                     tcttaccgat                                        
                     gagcaaccag                                        


//
Making a V in phase 1 intron
>OMLM01011960.1:subseq(84787,52184).pep
LKAVSLFVAELISSITDWFQTKPAWANLEVLENTELKPTEGVYEKQKAKTLWEKTGAVIM
VVRRPGXLLCREEAAELSSLKSQLQELEVPLFAVVKENLGNELNCFKKYFSGKVYVDQKR
NFYGPQTRWMFLSMFLRIGVWMNIWRAHRKGFRGNLRGEGFILGGVFVIGPGDQGVLLEH
REKEFGNKANLLAVLKTARKM
//
>OMLM01011960.1:subseq(84787,52184).[49778:50858].sp
CTGAAGGCAGTGAGCCTGTTTGTTGCAGAGCTCATCAGCTCCATCACAGACTGGTTCCAG
ACCAAGCCAGCATGGGCCAACCTAGAAGTGCTGGAGAACACAGAACTGAAGCCCACTGAA
GGTGTCTATGAGAAACAGAAGGCCAAGACTCTATGGGAGAAAACTGGAGCTGTGATCATG
GTTGTTCGGCGGCCTGGATGACTATTGTGCAGAGAGGAGGCTGCTGAGCTGTCCTCTCTG
AAGTCCCAGCTGCAGGAACTTGAAGTCCCTCTCTTCGCTGTGGTGAAAGAAAACCTTGGC
AATGAGCTGAACTGCTTCAAGAAGTACTTCTCTGGGAAGGTTTATGTGGACCAGAAGAGA
AATTTCTACGGCCCTCAAACACGGTGGATGTTTCTCTCCATGTTTCTACGTATTGGTGTG
TGGATGAATATCTGGAGGGCCCACAGGAAGGGCTTCAGGGGAAACCTAAGAGGTGAAGGA
TTTATCCTAGGTGGAGTCTTTGTCATTGGGCCAGGTGATCAGGGTGTTTTGCTGGAGCAC
CGAGAGAAGGAGTTTGGGAATAAAGCGAATTTGTTGGCAGTGCTCAAAACAGCCCGCAAA
ATG
//
OMLM01011960.1:subseq(84787,52184)	GeneWise	match	49778	50858	161.46	+	.	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
OMLM01011960.1:subseq(84787,52184)	GeneWise	cds	49778	49901	0.00	+	0	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
OMLM01011960.1:subseq(84787,52184)	GeneWise	intron	49902	50084	0.00	+	.	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
OMLM01011960.1:subseq(84787,52184)	GeneWise	cds	50085	50176	0.00	+	2	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
OMLM01011960.1:subseq(84787,52184)	GeneWise	intron	50177	50276	0.00	+	.	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
OMLM01011960.1:subseq(84787,52184)	GeneWise	cds	50277	50417	0.00	+	0	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
OMLM01011960.1:subseq(84787,52184)	GeneWise	intron	50418	50534	0.00	+	.	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
OMLM01011960.1:subseq(84787,52184)	GeneWise	cds	50535	50699	0.00	+	0	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
OMLM01011960.1:subseq(84787,52184)	GeneWise	intron	50700	50777	0.00	+	.	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
OMLM01011960.1:subseq(84787,52184)	GeneWise	cds	50778	50858	0.00	+	0	OMLM01011960.1:subseq(84787,52184)-genewise-prediction-1
//